Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818013.1_cds_XP_016499422.1_13346
CDS Infomation

[gene=LOC107818026] [db_xref=GeneID:107818026] [protein=myosin-binding protein 1-like isoform X4] [protein_id=XP_016499422.1] [location=complement(join(12193..13278,13405..13661,13978..15089,15221..15222))] [gbkey=CDS]
Sequence

ATGTTGCCCCTTAGTAGTGTTCAATTATCATTCTGCCATTGCACAAATTTCTTGAAAATG
GATGTAAAGGAGACTTTTAGTAAAGGAAAAACTAAAGGTCCTTTTAGTATAACAGCAGCT
TTAACTACAGCATTTCTTGAATGGTTGCTCATGATTTTTCTGTTTATGGACGGTGCTTTC
GCCTACTTAGTTACAAAGTTTGCTCAGTATTGCCAATTACAAGTTCCATGTTTGCTTTGC
TCGAGGCTGGATCATGTGCTTGGCAAGGAAAAAGCTGGATTTTACTGGGATTTAATATGC
CCCAATCATAAGTTGAAGATATCTTCATTAGTTCTTTGTCATTCTCACAATAACCTGGTT
GATGTTCATGGGATGTGTGAGAGTTGCCTGTTCTCATTTGCTACAGTAAATAAGTCGAAT
GCCGAAACCTATAGATTGCTGGTTGGAAAACTTGGGGCAGATTCTCACCTTGCTGATAAG
GATCCTTTACTCGAGGAGAAAACCAGTTGTTCCGCAGGAAAAATAAAATGTTATTGTTGT
AAAGAGGAATGTGTTTCCAGAGGATATTCCCAAAAATTGTTCAAGTTTACATCTTTGTGC
GCTGATGCAGCTCAACTTGATGCGCCTTTATCTGAAACTAAGGAGATTGGAAATGAGCCA
TCTGTTTCAGTCTATGATCCTTTGCCTCATTTGGAATATAAAAAGGTTAAGGTTAGCTCT
GATTCTGAATCAGAAGCTGCACACTCAGATGGTGATAGTGCTAGGTCTCTAATCCGTGCA
AGGGACAATTCTATAAATGATTCTTTAGATAGATGTTTGCATCCGGAACCTCAGACTTTT
ACTTTCACTGATGACCTTGCTACTGAGAAACTTGTACATTCAGCTTCAGTGCCCGAACCA
TCACTTCTAGATGCAGAAATTGATTTCAGATGTAGAGATTTCCCTTCTAATATGACATCT
GCTGCAGCAGTTGAGCATGGATTACAGGAACTCAACTGGCAGGAAGCTGAACAGAAGACT
GATGCATCTGCCCCAGCTGAGCTTATAACTTTTGATGAAGCCACCCCTTTGTCCATTGTC
AATGAAAATCTTGTTGATGTAGCTAGAGAGACCTCAGCTGCGGAGATGGTCAACCAAGTT
GTCAAAGTTCGTGGGGAAGTCTCTCGGACAAGAAGTGATGAGATCCCGAAGAGTGGAGCA
GAATTGGATTCTAAACCAGAGACAAATGAGATTAGTTTACAAACAGCTGGTTCATTTGAT
CTAGGTGATGCTTATAAGTTGGCTGTTGGCAATAGATCAAGGCAATTATCCGGAAAGTTT
TTGGAGCAGATGTCATTCAAGGATTCTACACGAATGAGTGAAGATCTGAAGATACTTCAT
AAAAGGATCTCGCTTGAGAGAAATGAATCTGGTTTATCTCTGGAAGGAAGCGCTGTGAGT
GAAATTGAAGGTGAGAGTGTGTCTGATCGTTTAAAACGACAGGTGGAGTATGATAGAAAA
CTAATGGCTGCTCTCTATAAGGAGTTGGAGGAAGAGAGAAATGCGTCCTCAGTTGCTGCA
AATCAGGCAATGGCAATGATTACAAGATTACAAGAGGAGAAGGCAGCACTGAACATGGAA
GCCCTGCAATGCCTAAGAGTGCTCGAAGAACAAGCTGAATACGACAATGAAGCACTGCAG
AAAGCAAATGATCTTCTTGCACAGAAGGAGAAAGAGATTCAAGATTTAGAAGCTGAACTT
GAACTTTACAAGAAGAAACTTGGGAACATGGCTCTATTTGATGATGCACTTGAGGCAAGT
TATGATTCAAATAATGCTAAGCAAGCTTATACTAATTGCAGTGAAGGCTGTTCATCATTT
CCTGACGTGAATGCTGATATACCCACCAGCAAATATGGAATGTCCTCTGGAGAGGAGAAC
ATATATAAGAGGAGTCTGATACTTGATTTTGAAAGTGAAAGACAGCAAATTATGTTTTGT
TTGAACAAATTGGAAGAAAGGCTCCATTTGTTCTCTAAGCATGAGGCTATTCAGGAGTCT
GCTAATGTGAACAGCGAGTTTTCAACAGAAGAATGGGTTGAAGTGGGTAATCCGAAAGAA
TTGGACAATAGCGAGTCTTCTAGAAGTAATGGTGAAATAGAGGAAAATGTTCGCCTAGAG
CCAACCGTCGACACAAGCCTTTCTGGTGTAGAAGTATCTACTTGCAAGTTTCCATATGAG
AGCAAATATAGGCAGTGCGCTGATGGAGATTCTGAGTTAGAGACTTTGAAAAATGAGTTA
TCAGTTTTGAGCAGCAGGCTGAATGCACTTGAAACAGAACACTGCTTTCTTGAGCACTCC
ATCAACTCACTGAGGAATGGAGATGAGGGGCATCGATTCATTAAGGAGATAGCTGGTCAC
TTGCGACAGTTGCATTTTGTTTGGGACAGAACAAATGGTGATCTTGCGAGTAAATAA

Peptide Sequence

PEP ID

XP_016499422.1
PEP Infomation

PREDICTED: myosin-binding protein 1-like isoform X4 [Nicotiana tabacum]
Sequence

MLPLSSVQLSFCHCTNFLKMDVKETFSKGKTKGPFSITAALTTAFLEWLLMIFLFMDGAF
AYLVTKFAQYCQLQVPCLLCSRLDHVLGKEKAGFYWDLICPNHKLKISSLVLCHSHNNLV
DVHGMCESCLFSFATVNKSNAETYRLLVGKLGADSHLADKDPLLEEKTSCSAGKIKCYCC
KEECVSRGYSQKLFKFTSLCADAAQLDAPLSETKEIGNEPSVSVYDPLPHLEYKKVKVSS
DSESEAAHSDGDSARSLIRARDNSINDSLDRCLHPEPQTFTFTDDLATEKLVHSASVPEP
SLLDAEIDFRCRDFPSNMTSAAAVEHGLQELNWQEAEQKTDASAPAELITFDEATPLSIV
NENLVDVARETSAAEMVNQVVKVRGEVSRTRSDEIPKSGAELDSKPETNEISLQTAGSFD
LGDAYKLAVGNRSRQLSGKFLEQMSFKDSTRMSEDLKILHKRISLERNESGLSLEGSAVS
EIEGESVSDRLKRQVEYDRKLMAALYKELEEERNASSVAANQAMAMITRLQEEKAALNME
ALQCLRVLEEQAEYDNEALQKANDLLAQKEKEIQDLEAELELYKKKLGNMALFDDALEAS
YDSNNAKQAYTNCSEGCSSFPDVNADIPTSKYGMSSGEENIYKRSLILDFESERQQIMFC
LNKLEERLHLFSKHEAIQESANVNSEFSTEEWVEVGNPKELDNSESSRSNGEIEENVRLE
PTVDTSLSGVEVSTCKFPYESKYRQCADGDSELETLKNELSVLSSRLNALETEHCFLEHS
INSLRNGDEGHRFIKEIAGHLRQLHFVWDRTNGDLASK

Transcript Sequence

Gene sequence data has not been registered.